Program

Program at a glance

10th11th12th13th
WedThuFriSat
09:00 - 09:30Registration09:00 - 10:00Tutorial09:00 - 17:00Hackathon09:00 - 15:00Hackathon
09:30 - 17:30Symposium10:00 - 11:00Grouping17:00 - 18:00Wrap-up15:00 - Grand Wrap-up
19:00 - 21:00Reception11:00 - 17:00Hackathon
17:00 - 18:00Wrap-up

Symposium Program (The full recording will be released soon)

09:30 - 11:0090Session 1
09:3010OpeningJin-Dong Kim
09:4040Biocur-AI-tion - machine learning and human intelligence KeynoteIoannis Xenarios
10:2010Mining linked annotations and Linked DataSenay Kafkas, Mona Alshahrani and Robert Hoehndorf
10:3010Grounding ontologies in literatureMaxat Kulmanov and Robert Hoehndorf
10:4010​(AGAC Corpus) Active Gene Annotation Corpus For The Application In Drug Repurposing DiscoveryJingbo Xia, Xuan Qin and Kaiyin Zhou
10:5010Bridging the gap between PDF and natural language textAkiko Aizawa
11:00 - 11:3030Coffee Break
11:30 - 12:3060Session 2
11:3040Interoperability for Biomedical Texts and Their Annotations: Current Practice, Options, and the Way Forward KeynoteNancy Ide
12:1010Context-aware co-occurrence scoring of disease-gene associationsAlexander Junge and Lars Juhl Jensen
12:2010PubAnnotation queries for closed concept discovery: linking species and diseases via intermediate biological conceptsEvangelos Pafilis and Lars Juhl Jensen
12:30 - 14:0090Lunch
14:00 - 15:3090Session 3
14:0040Using modern bioinformatics in order to find a cure for paralysis KeynoteBarbara Grimpe
14:4010Transforming SemRep Predications into a Biomedical Linked Data ResourceTiffany J. Callahan, William A. Baumgartner Jr. and Olivier Bodenreider
14:5010SCIRT: A New Corpus of Annotated Full-Text Articles on Spinal Cord Injury and Regeneration of the Mammalian Central Nervous SystemIvo Georgiev
15:0010Reconstruction and visualisation of gene regulatory networks from different provenances : application at Arabidopsis thalianaEstelle Chaix, Robert Bossy and Claire Nédellec
15:1010Data Exchange Solution between PubAnnotation and AlvisAEMouhamadou Ba, Robert Bossy, and Claire Nedellec
15:2010Identifying disease-phenotype associations using PubAnnotation and PubDictionaries for supporting diagnosis of intractable diseasesToyofumi Fujiwara
15:30 - 16:0030Coffee Break
16:00 - 17:3090Session 4
16:0040Open Health Natural Language Processing - ensuring reproducibility for NLP-empowered applications KeynoteHongfang Liu
16:4010The Bio Term Hub and OGERLenz Furrer, Nico Colic and Fabio Rinaldi
16:5010Machine-assisted Variant CurationKyubum Lee, Chih-Hsuan Wei, Livia Famiglietti, Sylvain Poux, Lionel Breuza, Alan Bridge, Ioannis Xenarios and Zhiyong Lu
17:0010Literature-based knowledge discovery using PubTator and WikidataJake Lever and Steven Jones
17:1010Informatician, heal thyself: What happened when I tried to replicate my own experimentKevin Bretonnel Cohen
17:2010Closing
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Jin-Dong Kim,
Jan 9, 2018, 5:02 PM
Ċ
Jin-Dong Kim,
Jan 9, 2018, 8:09 PM
Ċ
Jin-Dong Kim,
Jan 12, 2018, 4:51 AM
Ċ
Jin-Dong Kim,
Jan 9, 2018, 5:48 PM
Ċ
Jin-Dong Kim,
Jan 9, 2018, 8:45 PM
Ċ
Jin-Dong Kim,
Jan 10, 2018, 1:35 PM
Ċ
Jin-Dong Kim,
Jan 9, 2018, 7:51 PM
Ċ
Jin-Dong Kim,
Jan 9, 2018, 8:34 PM
Ċ
Jin-Dong Kim,
Jan 9, 2018, 8:08 PM
Ċ
Jin-Dong Kim,
Jan 10, 2018, 1:35 PM
Ċ
Jin-Dong Kim,
Jan 9, 2018, 9:56 PM
Ċ
Jin-Dong Kim,
Jan 9, 2018, 5:02 PM